ProGP379

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ProGP ID ProGP379
Validation Status Characterized
Organism Information
Organism NameCampylobacter jejuni HB93-13
Domain Bacteria
Classification Family: Campylobacteraceae
Order: "Campylobacterales"
Class: "Epsilonproteobacteria"
Division or phylum: "Proteobacteria"
Taxonomic ID (NCBI) 192222
Genome Sequence(s)
GenBank NC_002163.1. 
EMBL AL111168 
Gene Information
Gene Namecj0599
NCBI Gene ID 904924. 
GenBank Gene Sequence NC_002163.1. 
Protein Information
Protein NamePutative OmpA family membrane protein
UniProtKB/SwissProt ID Q0PAR8
NCBI RefSeq WP_002858561.1
EMBL-CDSCAL34745.1.
UniProtKB Sequence >tr|Q0PAR8|Q0PAR8_CAMJE Putative OmpA family membrane protein OS=Campylobacter jejuni subsp. jejuni serotype O:2 (strain ATCC 700819 / NCTC 11168) GN=Cj0599 PE=1 SV=1 MKNESKEDSNFWIAYADLMAGLLFVFILLIGAIVVKYVLTQSDLKEIKDNLNKQEARLEE SKEELRNKEAIVFKLSSDLNNASSALNLANSQKAELEANITNYKQLSKDLNSTLDNKDKQ ILILLGQLEKKDEELKNLQEDFQKAKEKVQNLGLIRENLSKELQSKLDNNITIDEKIGSI SLPAEVLFDKDSYVLKNEAKASLRKILSEYFDAILEDPKIFSNIENIIIEGHTDSDGSYI YNLDLSQKRAYEVMNFIYTFYKSDKLQKLLMASGRSFSDPVFVNGVEDKDKSRRIEIKFS IKNDNALKDVEKFFEFH
Sequence length 317 AA
Glycosylation Status
Glycosylation Type N (Asn) linked
Experimentally Validated Glycosite(s) in Full Length ProteinN99, N111 and N170
Glycosite(s) Annotated Protein Sequence >tr|Q0PAR8|Q0PAR8_CAMJE Putative OmpA family membrane protein OS=Campylobacter jejuni subsp. jejuni serotype O:2 (strain ATCC 700819 / NCTC 11168) GN=Cj0599 PE=1 SV=1 MKNESKEDSNFWIAYADLMAGLLFVFILLIGAIVVKYVLTQSDLKEIKDNLNKQEARLEE SKEELRNKEAIVFKLSSDLNNASSALNLANSQKAELEANITN*(99)YKQLSKDLN*(111)STLDNKDKQ ILILLGQLEKKDEELKNLQEDFQKAKEKVQNLGLIRENLSKELQSKLDNNITIDEKIGSI SLPAEVLFDKDSYVLKN*(170)EAKASLRKILSEYFDAILEDPKIFSNIENIIIEGHTDSDGSYI YNLDLSQKRAYEVMNFIYTFYKSDKLQKLLMASGRSFSDPVFVNGVEDKDKSRRIEIKFS IKNDNALKDVEKFFEFH
Sequence Around Glycosites (21 AA) ANSQKAELEANITNYKQLSKD
TNYKQLSKDLNSTLDNKDKQI
SKELQSKLDNNITIDEKIGS
Glycosite Sequence Logo
Technique(s) used for Glycosylation DetectionZIC-HILIC enrichment
Technique(s) used for Glycosylated Residue(s) Detection Reversed Phase LC-Tandem CID/HCD-MS
Glycan Information
Glycan Annotation Heptasaccharide GalNAc- α1,4-GalNAc- α1,4-(Glc β1,3)-GalNAc- α1,4-GalNAc- α1,4-GalNAc- α1,3-Bac- β1 where Bac is bacillosamine (2,4-diacetamido-2,4,6-trideoxyglucopyranose)
BCSDB ID20059
Technique(s) used for Glycan Identification Reversed Phase LC-Tandem CID/HCD-MS
Literature
Year of Identification2011
Year of Identification Month Wise2011.2.10
Year of Validation 2011
ReferenceScott NE, Parker BL, Connolly AM, Paulech J, Edwards AV, Crossett B, Falconer L, Kolarich D, Djordjevic SP, Højrup P, Packer NH, Larsen MR, Cordwell SJ. (2011) Simultaneous glycan-peptide characterization using hydrophilic interaction chromatography and parallel fragmentation by CID, higher energy collisional dissociation, and electron transfer dissociation MS applied to the N-linked glycoproteome of Campylobacter jejuni. Mol Cell Proteomics. 2011 Feb;10(2):M000031-MCP201.
AuthorScott NE, Parker BL, Connolly AM, Paulech J, Edwards AV, Crossett B, Falconer L, Kolarich D, Djordjevic SP, Højrup P, Packer NH, Larsen MR, Cordwell SJ
Research GroupSchool of Molecular and Microbial Biosciences, University of Sydney, Sydney, Australia
Corresponding Author Cordwell SJ
ContactSchool of Molecular and Microbial Biosciences, University of Sydney, Sydney, Australia