ProGP380

Home -> ProGPdb -> Search ProGP -> Display data

ProGP ID ProGP380
Validation Status Characterized
Organism Information
Organism NameCampylobacter jejuni HB93-13
Domain Bacteria
Classification Family: Campylobacteraceae
Order: "Campylobacterales"
Class: "Epsilonproteobacteria"
Division or phylum: "Proteobacteria"
Taxonomic ID (NCBI) 192222
Genome Sequence(s)
GenBank NC_002163.1. 
EMBL AL111168 
Gene Information
Gene Namecj0608
NCBI Gene ID 904936. 
GenBank Gene Sequence NC_002163.1. 
Protein Information
Protein NamePutative outer membrane efflux protein
UniProtKB/SwissProt ID Q0PAQ9
NCBI RefSeq WP_010891866.1
EMBL-CDSCAL34754.1.
UniProtKB Sequence >tr|Q0PAQ9|Q0PAQ9_CAMJE Putative outer membrane efflux protein OS=Campylobacter jejuni subsp. jejuni serotype O:2 (strain ATCC 700819 / NCTC 11168) GN=Cj0608 PE=4 SV=1 MKIILSIFLAFFLSACGVKLSLPKEVDLTQEQMKDLNLTYDWYRSYDNAKLNEFLNFVLL NNSDINIARKTLLSALARADLIDYDLYPTLSGNLGFGADKDLNSGKQSKNFNNSLNLSYE LDIYGKLRDSASASEFSAKASAYDLENLKISMINTALNDVFELAYFNDVDKLLRAYLSNL EQMKELYNYKYKLGKIEELDLLNIEQSLLRAKQNLLSNDQNRNLLIKNLQDLLARQEGFA YIEYFKTLSLNDFKTLSPDFNIPLKALAYRADVRSKLNSLKSAFKDYSSMQKSILPSISL GGALSGSDKKIDDSFKFEILSGNVKISLPFLDYGRVKQNIKISQFAYEQLLISYEQVLQS AMNEFALNYKDYQSDTLLLQNLQNINIKQELITKAYYEKYILGKSELKDYLDANNTLNST QQEFLRARFNLLKTINSYYQITALSFNNENLEFPKY
Sequence length 456 AA
Glycosylation Status
Glycosylation Type N- (Asn) linked
Experimentally Validated Glycosite(s) in Full Length ProteinN37
Glycosite(s) Annotated Protein Sequence >tr|Q0PAQ9|Q0PAQ9_CAMJE Putative outer membrane efflux protein OS=Campylobacter jejuni subsp. jejuni serotype O:2 (strain ATCC 700819 / NCTC 11168) GN=Cj0608 PE=4 SV=1 MKIILSIFLAFFLSACGVKLSLPKEVDLTQEQMKDLN*(37)LTYDWYRSYDNAKLNEFLNFVLL NNSDINIARKTLLSALARADLIDYDLYPTLSGNLGFGADKDLNSGKQSKNFNNSLNLSYE LDIYGKLRDSASASEFSAKASAYDLENLKISMINTALNDVFELAYFNDVDKLLRAYLSNL EQMKELYNYKYKLGKIEELDLLNIEQSLLRAKQNLLSNDQNRNLLIKNLQDLLARQEGFA YIEYFKTLSLNDFKTLSPDFNIPLKALAYRADVRSKLNSLKSAFKDYSSMQKSILPSISL GGALSGSDKKIDDSFKFEILSGNVKISLPFLDYGRVKQNIKISQFAYEQLLISYEQVLQS AMNEFALNYKDYQSDTLLLQNLQNINIKQELITKAYYEKYILGKSELKDYLDANNTLNST QQEFLRARFNLLKTINSYYQITALSFNNENLEFPKY
Sequence Around Glycosites (21 AA) DLTQEQMKDLNLTYDWYRSYD
Technique(s) used for Glycosylation DetectionZIC-HILIC enrichment
Technique(s) used for Glycosylated Residue(s) Detection Reversed Phase LC-Tandem CID/HCD-MS
Glycan Information
Glycan Annotation Heptasaccharide GalNAc- α1,4-GalNAc- α1,4-(Glc β1,3)-GalNAc- α1,4-GalNAc- α1,4-GalNAc- α1,3-Bac- β1 where Bac is bacillosamine (2,4-diacetamido-2,4,6-trideoxyglucopyranose)
BCSDB ID20059
Technique(s) used for Glycan Identification Reversed Phase LC-Tandem CID/HCD-MS
Literature
Year of Identification2011
Year of Identification Month Wise2011.2.10
Year of Validation 2011
ReferenceScott NE, Parker BL, Connolly AM, Paulech J, Edwards AV, Crossett B, Falconer L, Kolarich D, Djordjevic SP, Højrup P, Packer NH, Larsen MR, Cordwell SJ. (201Simultaneous glycan-peptide characterization using hydrophilic interaction chromatography and parallel fragmentation by CID, higher energy collisional dissociation, and electron transfer dissociation MS applied to the N-linked glycoproteome of Campylobacter jejuni. Mol Cell Proteomics. 2011 Feb;10(2):M000031-MCP201.
AuthorScott NE, Parker BL, Connolly AM, Paulech J, Edwards AV, Crossett B, Falconer L, Kolarich D, Djordjevic SP, Højrup P, Packer NH, Larsen MR, Cordwell SJ
Research GroupSchool of Molecular and Microbial Biosciences, University of Sydney, Sydney, Australia
Corresponding Author Cordwell SJ
ContactSchool of Molecular and Microbial Biosciences, University of Sydney, Sydney, Australia