ProGP493 (CN)

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ProGP ID ProGP493 (CN)
Validation Status Characterized
Organism Information
Organism NameNeisseria elongata subsp. glycolytica
Domain Bacteria
Classification Phylum : Proteobacteria
Class : Betaproteobacteria
Orders : Neisseriales
Family : Neisseriaceae
Genus : Neisseria
Species : elongata
Subspecies : glycolytica
Strain : ATCC 29315
Taxonomic ID (NCBI) 546263
Genome Information
GenBank ADBF01000023
EMBL ADBF01000023
Gene Information
Gene NamecycC (NEIELOOT_00905)
Protein Information
Protein NameCN
UniProtKB/SwissProt ID D4DPB8
EMBL-CDSEFE50226.1
UniProtKB Sequence >tr|D4DPB8|D4DPB8_NEIEG Uncharacterized protein OS=Neisseria elongata subsp. glycolytica ATCC 29315 GN=NEIELOOT_00905 PE=4 SV=1 MNKLLIAAMMMAALTACSQEAKQETKEAAQAIASDVKNNTASAVDAAASSVQEAASKVAD TAEKAASEVKEAVAPEAKPAEKTEAPAAKVDGKAVYEATCKACHSGTIPGTPGVGKKTSG NHVSNKVKKPCTNTRLKASKVCLPKAVTKV
Sequence length 150 AA
Function A c-type monoheme cytochrome
Glycosylation Status
Glycosylation Type O- (Ser) linked
Experimentally Validated Glycosite(s) in Full Length ProteinS34, S42 and S49
Glycosite(s) Annotated Protein Sequence >tr|D4DPB8|D4DPB8_NEIEG Uncharacterized protein OS=Neisseria elongata subsp. glycolytica ATCC 29315 GN=NEIELOOT_00905 PE=4 SV=1 MNKLLIAAMMMAALTACSQEAKQETKEAAQAIAS*(32)DVKNNTAS*(42)AVDAAAS*(49)SVQEAASKVAD TAEKAASEVKEAVAPEAKPAEKTEAPAAKVDGKAVYEATCKACHSGTIPGTPGVGKKTSG NHVSNKVKKPCTNTRLKASKVCLPKAVTKV
Sequence Around Glycosites (21 AA) ETKEAAQAIASDVKNNTASAV
IASDVKNNTASAVDAAASSVQ
NTASAVDAAASSVQEAASKVA
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Technique(s) used for Glycosylation DetectionDifference in mobility on immunoblots
Technique(s) used for Glycosylated Residue(s) Detection ETD fragmentation
Glycan Information
Glycan Annotation A Tetrasaccharide glycoform consisting of di-N-acetylbacillosamine-glucose-di-N-acetyl hexuronic acid-N-acetylhexosamine (diNAcBac-Glc-diNAcHexA-HexNAc).
Technique(s) used for Glycan Identification Mass spectrometry
Protein Glycosylation linked (PGL) gene(s)
Characterized Accessory Gene(s)pglBCDHG
Literature
Year of Identification2014
Year of Identification Month Wise2014.6.1
Year of Validation 2016
ReferenceAnonsen, J.H., Vik, Å., Børud, B., Viburiene, R., Aas, F.E., Kidd, S.W., Aspholm, M. and Koomey, M., 2016. Characterization of a unique tetrasaccharide and distinct glycoproteome in the O-linked protein glycosylation system of Neisseria elongata subsp. glycolytica. Journal of bacteriology, 198(2), pp.256-267.
Corresponding Author Michael Koomey
ContactDepartment of Biosciences, University of Oslo, Oslo, Norway Center for Ecological and Evolutionary Synthesis, University of Oslo, Oslo, Norway
ReferenceAas FE, Li X, Edwards J, Hongrø Solbakken M, Deeudom M, Vik Å, Moir J, Koomey M, Aspholm M. (2014) Cytochrome c-based domain modularity governs genus-level diversification of electron transfer to dissimilatory nitrite reduction. Environ Microbiol., 17(6), 2114-32. [PMID: 25330335]
Corresponding Author Marina Aspholm
ContactDepartment of Biosciences, University of Oslo, Oslo, N-0316, Norway