ProGP220 (Cj0200c)

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ProGP ID ProGP220 (Cj0200c)
Validation Status Characterized
Organism Information
Organism NameCampylobacter jejuni NCTC 11168 serotype O:2
Domain Bacteria
Classification Phylum : Proteobacteria
Class : Epsilonproteobacteria
Orders : Campylobacterales
Family : Campylobacteraceae
Genus : Campylobacter
Species : jejuni
Subspecies : jejuni
Strain : NCTC 11168 serotype O:2
Taxonomic ID (NCBI) 192222
Genome Information
GenBank AL111168.1
EMBL AL111168
Organism Additional Information Campylobacter jejuni is a microaerophilic, Gram-negative, human pathogen that is the major cause of bacterial food-borne diarrhoea (gastroenteritis). It is most frequently responsible for a form of post-infection neuromuscular paralysis known as Guillain Barre' syndrome. It also leads to an immunoproliferative small intestine disease that is a rare malignant lymphoma of the intestine. Motility is essential for pathogenicity.
Gene Information
Gene NameCj0200c
NCBI Gene ID 904543
GenBank Gene Sequence NC_002163
Protein Information
Protein NameCj0200c
UniProtKB/SwissProt ID Q0PBT9
NCBI RefSeq YP_002343658.1
EMBL-CDSCAL34369.1
UniProtKB Sequence >tr|Q0PBT9|Q0PBT9_CAMJE Putative periplasmic protein OS=Campylobacter jejuni GN=Cj0200c PE=1 SV=1 MKKSILFASALLASSMLFADSLKLEGTIAQIYDNNKTLLIDSIYGGQMAIKVLPNTEIEM DDCGIFGTDKDGTFKDLQVGNFLESKISYGTPATPNTQAIPVARKIEIQCYKKAY
Sequence length 115 AA
Subcellular LocationPutative periplasmic
Glycosylation Status
Glycosylation Type N- (Asn) linked
Experimentally Validated Glycosite(s) in Full Length ProteinN35
Experimentally Validated Glycosite(s ) in Mature ProteinN35
Glycosite(s) Annotated Protein Sequence >tr|Q0PBT9|Q0PBT9_CAMJE Putative periplasmic protein OS=Campylobacter jejuni GN=Cj0200c PE=1 SV=1 MKKSILFASALLASSMLFADSLKLEGTIAQIYDNN*(35)KTLLIDSIYGGQMAIKVLPNTEIEM DDCGIFGTDKDGTFKDLQVGNFLESKISYGTPATPNTQAIPVARKIEIQCYKKAY
Sequence Around Glycosites (21 AA) EGTIAQIYDNNKTLLIDSIYG
Technique(s) used for Glycosylation DetectionSBA (soybean agglutinin) lectin-agarose affinity chromatography
Technique(s) used for Glycosylated Residue(s) Detection CapLC-MS/MS (capillary liquid chromatography-tandem mass spectrometry)
Glycan Information
Glycan Annotation Linkage: Bac-Asn.
1406 Da heptasaccharide composed of GalNAc-α1,4-GalNAc-α1,4-[Glcβ1,3-]GalNAc-α1,4-GalNAc-α1,4-GalNAc-α1,3-Bac-β1,N-Asn-Xaa, where Bac is bacillosamine, 2,4-diacetamido-2,4,6-trideoxyglucopyranose.
BCSDB ID 23625
GlyTouCan G58528CE
Technique(s) used for Glycan Identification 1H, 13C NMR spectroscopy- one dimensional TOCSY (total correlation spectroscopy) and NOESY (nuclear Overhauser effect spectroscopy); HMBC (heteronuclear multiple bond coherence), HMQC (heteronuclear multiple quantum correlation) spectra.
Protein Glycosylation linked (PGL) gene(s)
OST Gene NamePglB
OST ProGT IDProGT10
Characterized Accessory Gene(s)PglA, PglJ, PglH, PglI, PglC are glycosyltransferases involved in the heptasaccharide assembly. PglFED are the bacillosamine biosynthetic enzymes. PglK is a flippase.
Accessory Gene(s)Progt IDProGT10.1, ProGT10.2, Pro
Additional CommentSequon feature: The consensus sequence for the C jejuni PglB is D/E-X'-N-X"-S/T (where X' and X" stand for any amino acid except proline) which is glycosylated when located in flexible, exposed structural elements. Tripeptide sequence NLT too has been found to be modified in vitro.
Literature
Year of Identification2002
Year of Identification Month Wise2002.11.29
Year of Validation 2002
ReferenceMaita, N., Nyirenda, J., Igura, M., Kamishikiryo, J. and Kohda, D., 2010. Comparative Structural Biology of Eubacterial and Archaeal Oligosaccharyltransferases 2. Journal of Biological Chemistry, 285(7), pp.4941-4950.
Corresponding Author Daisuke Kohda
ContactDivision of Structural Biology, Medical Institute of Bioregulation, Kyushu University, Maidashi 3-1-1, Higashi-ku, Fukuoka 812-8582, Japan.
ReferenceOlivier, N.B., Chen, M.M., Behr, J.R. and Imperiali, B., 2006. In vitro biosynthesis of UDP-N, N ‘-diacetylbacillosamine by enzymes of the Campylobacter jejuni general protein glycosylation system. Biochemistry, 45(45), pp.13659-13669.
Corresponding Author Barbara Imperiali
ContactDepartment of Chemistry, Massachusetts Institute of Technology, 77 Massachusetts Avenue, Cambridge, Massachusetts 02139, USA.
ReferenceYoung, N.M., Brisson, J.R., Kelly, J., Watson, D.C., Tessier, L., Lanthier, P.H., Jarrell, H.C., Cadotte, N., Michael, F.S., Aberg, E. and Szymanski, C.M., 2002. Structure of the N-linked glycan present on multiple glycoproteins in the Gram-negative bacterium, Campylobacter jejuni. Journal of Biological Chemistry, 277(45), pp.42530-42539.
Corresponding Author N Martin Young
ContactInstitute for Biological Sciences, National Research Council of Canada, 100 Sussex Dr., Ottawa, Ontario K1A 0R6, Canada.
ReferenceScott, N.E., Parker, B.L., Connolly, A.M., Paulech, J., Edwards, A.V., Crossett, B., Falconer, L., Kolarich, D., Djordjevic, S.P., Højrup, P. and Packer, N.H., 2011. Simultaneous glycan-peptide characterization using hydrophilic interaction chromatography and parallel fragmentation by CID, higher energy collisional dissociation, and electron transfer dissociation MS applied to the N-linked glycoproteome of Campylobacter jejuni. Molecular & cellular proteomics, 10(2), pp.S1-S18.
Corresponding Author Stuart J Cordwell
ContactSchool of Molecular and Microbial Biosciences, University of Sydney, Sydney, Australia